CDS

Accession Number TCMCG016C13701
gbkey CDS
Protein Id OMO78184.1
Location join(25791..25986,27316..27392,27502..27624,28244..28348,28667..28739,28825..28896,28993..29188,29445..29574,29739..29801)
Organism Corchorus capsularis
locus_tag CCACVL1_14593

Protein

Length 344aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010603.1
Definition Spermidine/spermine synthases family [Corchorus capsularis]
Locus_tag CCACVL1_14593

EGGNOG-MAPPER Annotation

COG_category H
Description Belongs to the spermidine spermine synthase family
KEGG_TC -
KEGG_Module M00034        [VIEW IN KEGG]
M00133        [VIEW IN KEGG]
KEGG_Reaction R01920        [VIEW IN KEGG]
R02869        [VIEW IN KEGG]
R08359        [VIEW IN KEGG]
KEGG_rclass RC00021        [VIEW IN KEGG]
RC00053        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00797        [VIEW IN KEGG]
EC 2.5.1.16        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00270        [VIEW IN KEGG]
ko00330        [VIEW IN KEGG]
ko00410        [VIEW IN KEGG]
ko00480        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00270        [VIEW IN KEGG]
map00330        [VIEW IN KEGG]
map00410        [VIEW IN KEGG]
map00480        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004766        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006576        [VIEW IN EMBL-EBI]
GO:0006595        [VIEW IN EMBL-EBI]
GO:0006596        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008216        [VIEW IN EMBL-EBI]
GO:0008295        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009308        [VIEW IN EMBL-EBI]
GO:0009309        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016765        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042401        [VIEW IN EMBL-EBI]
GO:0044106        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097164        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAGAAGAGAGCGCTGCCCCTGTGAGTTGTTCGGATTTGCCTGTTAAAAGGCCAAGAGAAGAAGAAGAAGAAGAGAACGGGGTTTCAGCGGCTGCCATGGAAACTGAAGTTGATAACAATAACGTTAAGCCAGCTGATGGGATTTCCTCTGTTATCCCTGGATGGTTCTCTGAGATTAGCCCAATGTGGCCTGGAGAGGCTCATTCCTTGAAGGTTGAAAAGATATTATTTCAAGGGAAATCCGATTATCAGAATGTTATGGTCTTTCAGTCATCAACATATGGAAAGGTTCTTGTTTTGGATGGCGTGATTCAGCTCACAGAGAGAGATGAATGTGCTTATCAAGAAATGATCACTCACCTTCCTCTTTGCTCCATTCCAAATCCAAAAAAGGTTTTGGTCATTGGTGGTGGAGATGGTGGAGTTCTCAGAGAAGTTTCTCGTCATTCTTCTGTTGAGCAGATTGACATCTGTGAAATTGATAAGATGGTAGTTGATGTTTCTAAACAATTTTTCCCCGATGTAGCTGTTGGTTATGAGGATCCTCGTGTGAACCTTCATATTGGTGATGGAGTTGCATTTTTGAAGGCTGTTCCGGAAGGTACTTATGATGCAGTTATAGTGGATTCTTCTGACCCGATAGGTCCTGCACAAGAGCTTTTTGAGAAGCCCTTTTTTGAGTCAGTGGCAAAGGCTCTTCGTCCAGGTGGAGTGGTGTGTACTCAGGCAGAAAGTATCTGGCTACATATGCACATCATTGAGGATATTGTAGCAAACTGCCGCCAAATCTTCAAAGGCTCCGTTAACTATGCATGGACTACAGTTCCAACATATCCAAGTGGTGTGATTGGTTTCATGCTTTGCTCAACTGAGGGACCTTCTGTTGACTTCAAGCATCCTGTGAACCCTATAGACACTGATGAGAACTGCAGCAAATCAAAACGACCCCTAAGGTTTTACAATTCTGAGATTCATTCCGCTGCTTTCTGTTTGCCTTCCTTTGCAAAGAAGGTGATCGAGGCAAAAGCTTAA
Protein:  
MAEESAAPVSCSDLPVKRPREEEEEENGVSAAAMETEVDNNNVKPADGISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVDVSKQFFPDVAVGYEDPRVNLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPSVDFKHPVNPIDTDENCSKSKRPLRFYNSEIHSAAFCLPSFAKKVIEAKA